suntans移植指南

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suntans-stanford官网

suntans-GitHub官网

suntans介绍：

斯坦福非结构化网格、非流体静力、平行沿海海洋模型。用于在河口和沿海以高分辨率模拟非静水流。需要网格生成器和 ParMETIS（如果并行运行）。

获取源码

使用GitHub上的源码包：

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wget https://github.com/ofringer/suntans/archive/master.zip
unzip suntans-master.zip

编译安装

如果已经安装X11则无需执行此步骤

进入main/，并修改Makefile

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>XLDFLAGS= -lX11 -lm
>XINC=/path/to/X11/lib
>XLIBDIR = /path/to/X11/lib


>INCLUDES = $(PARMETISINCLUDE) $(TRIANGLEINCLUDE) $(NETCDFINCLUDE) $(XINC)

执行make安装

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cd suntans-master/examples/cylinder
make test
cd ../../main
make sunplot
./sunplot --datadir=../examples/cylinder/data

spack安装脚本

package.py
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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *

class Suntans(MakefilePackage):
    """The Stanford unstructured-grid,
    nonhydrostatic, parallel coastal
    ocean model. """

    homepage = "https://github.com/ofringer/suntans"
    url      = "https://github.com/ofringer/suntans/archive/master.zip"

    maintainers = ['ofringer', 'zyaj', 'mrayson', 'jadelson', 'lhxone']

    version('0.0.1', '9b5d0dee5502a5650e37bf72f64b1124be86c084e7408aa517c214ddb25e36de')

    depends_on('[email protected]', type = ('build', 'run'))
    depends_on('openmpi', type = ('build'))

    def edit(self, spec, prefix):
        env['MPIHOME'] = spec['openmpi'].prefix
        with working_dir('main'):
            makefile = FileFilter('Makefile')
            makefile.filter('XINC=.*', 'XINC= -I{0}'.format(spec['libx11'].prefix.include))
            makefile.filter('XLIBDIR = .*', 'XLIBDIR = {0}'.format(spec['libx11'].prefix.lib))
            makefile.filter('INCLUDES = .*', 'INCLUDES = $(PARMETISINCLUDE) $(TRIANGLEINCLUDE) $(NETCDFINCLUDE) $(XINC)')

    def build(self, spec, prefix):
        build_targets = ['CC = mpicc']
        with working_dir('examples/cylinder'):
            make('test')
        with working_dir('main'):
            make('sunplot')

    def install(self, spec, prefix):
        mkdir(prefix.bin)
        mkdir(prefix.include)
        with working_dir('main'):
            install('sunplot', prefix.bin)
            install('*.h', prefix.include)